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DB built by FlyBase

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Gene: Adf1 FBgn0284249

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Description

Adh transcription factor 1

Gene Synonyms

Location

Primary_assembly 2R: 6,662,265-6,668,085 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 4 transcripts (splice variants), 23 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Adf1-RE	FBtr0330252	1668	274aa	FBpp0303284	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KEJ0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Adf1-RB	FBtr0086112	1795	253aa	FBpp0085447	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Adf1-RC	FBtr0086113	1675	262aa	FBpp0089262	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6SUW9 P05552	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Adf1-RA	FBtr0086111	1668	253aa	FBpp0085446	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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