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DB built by FlyBase

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Gene: Imp FBgn0285926

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Description

IGF-II mRNA-binding protein

Gene Synonyms

Location

Primary_assembly X: 10,787,869-10,824,277 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 12 transcripts (splice variants), 83 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Imp-RL	FBtr0305150	4220	638aa	FBpp0293680	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NF14	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Imp-RH	FBtr0073414	12045	573aa	FBpp0073270	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IR99	-	-
Imp-RD	FBtr0073416	8752	573aa	FBpp0073272	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IR99	-	-
Imp-RC	FBtr0073418	6762	566aa	FBpp0073274	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9YL40 F6J5L2 Q9VZ69	-	-
Imp-RG	FBtr0073415	5684	573aa	FBpp0073271	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IR99	-	-
Imp-RF	FBtr0073413	4481	573aa	FBpp0073269	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IR99	-	-
Imp-RJ	FBtr0301409	3942	580aa	FBpp0290623	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJM0 Q8IGK4	-	-
Imp-RM	FBtr0346315	3824	638aa	FBpp0312047	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NF14	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Imp-RE	FBtr0073417	3711	573aa	FBpp0073273	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IR99	-	-
Imp-RK	FBtr0305149	3468	631aa	FBpp0293679	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KHU2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Imp-RA	FBtr0073420	3300	566aa	FBpp0073276	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZ69	-	-
Imp-RB	FBtr0073419	2863	566aa	FBpp0073275	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZ69	-	-

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Summary

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