Location
About this transcript

This transcript has 5 exons, is annotated with 51 domains and features, is associated with 82 variations and maps to 20 oligo probes.

Gene

This transcript is a product of gene AGAP000048 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000048-RA59421896aaAGAP000048-PA
 
Protein coding
A7USK1 XM_001687701.2
XP_001687753.2
Statistics

Exons: 5, Coding exons: 5, Transcript length: 5,942 bps, Translation length: 1,896 residues

Version

AGAP000048-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays