Description

peptidyl-prolyl isomerase F (cyclophilin D) [Source:VB External Description;Acc:AGAP000462]

Location
About this transcript

This transcript has 3 exons, is annotated with 14 domains and features, is associated with 1 variation and maps to 51 oligo probes.

Gene

This transcript is a product of gene AGAP000462 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000462-RB1326164aaAGAP000462-PB
 
Protein coding
Q7PS16 XM_003436954.1
XM_310632.5
XP_003437002.1
XP_310632.5
NovelAGAP000462-RA1288164aaAGAP000462-PA
 
Protein coding
Q7PS16 XM_003436954.1
XM_310632.5
XP_003437002.1
XP_310632.5
Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,326 bps, Translation length: 164 residues

Version

AGAP000462-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays