Location
About this transcript

This transcript has 6 exons, is annotated with 20 domains and features, is associated with 10 variations and maps to 25 oligo probes.

Gene

This transcript is a product of gene AGAP000672 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000672-RB1519398aaAGAP000672-PB
 
Protein coding
Q7QEG0 XM_003437006.1
XM_311198.4
XP_003437054.1
XP_311198.2
NovelAGAP000672-RA1481398aaAGAP000672-PA
 
Protein coding
Q7QEG0 XM_003437006.1
XM_311198.4
XP_003437054.1
XP_311198.2
Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,481 bps, Translation length: 398 residues

Version

AGAP000672-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays