Description

mitogen-activated protein kinase kinase kinase 5 [Source:VB External Description;Acc:AGAP000747]

Location
About this transcript

This transcript has 6 exons, is annotated with 31 domains and features, is associated with 42 variations and maps to 27 oligo probes.

Gene

This transcript is a product of gene AGAP000747 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000747-RB58331499aaAGAP000747-PB
 
Protein coding
F5HJX5 Q7QEA6 XM_003437040.1
XM_003437041.1
XM_311281.5
XP_003437088.1
XP_311281.5
NovelAGAP000747-RA52361481aaAGAP000747-PA
 
Protein coding
Q7QEA6 XM_003437041.1
XM_311281.5
XP_311281.5
NovelAGAP000747-RC2632594aaAGAP000747-PC
 
Protein coding
F5HJX6 XM_003437041.1
XP_003437089.1
Statistics

Exons: 6, Coding exons: 5, Transcript length: 5,236 bps, Translation length: 1,481 residues

Version

AGAP000747-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays