Description

alkylated DNA repair protein alkB homolog 7 [Source:VB External Description;Acc:AGAP000760]

Location
About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 14 variations and maps to 24 oligo probes.

Gene

This transcript is a product of gene AGAP000760 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP000760-RA986258aaAGAP000760-PA
 
Protein coding
F5HJY0 XM_003437045.1
XM_003437046.1
XM_311296.4
XP_003437093.1
XP_003437094.1
XP_311296.3
NovelAGAP000760-RC981258aaAGAP000760-PC
 
Protein coding
F5HJY0 XM_003437045.1
XM_003437046.1
XM_311296.4
XP_003437093.1
XP_003437094.1
XP_311296.3
NovelAGAP000760-RB979258aaAGAP000760-PB
 
Protein coding
F5HJY0 XM_003437045.1
XM_003437046.1
XM_311296.4
XP_003437093.1
XP_003437094.1
XP_311296.3
Statistics

Exons: 4, Coding exons: 3, Transcript length: 981 bps, Translation length: 258 residues

Version

AGAP000760-RC.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays