Description

myofilin variant B [Source:VB External Description;Acc:AGAP001023]

Location
About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature and maps to 35 oligo probes.

Gene

This transcript is a product of gene AGAP001023 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001023-RA1244155aaAGAP001023-PA
 
Protein coding
F5HJ34 XM_003437123.1
XM_003437124.1
XM_003437125.1
XM_003437126.1
XM_003437127.1
XM_309217.5
XP_003437171.1
XP_003437172.1
XP_003437173.1
XP_003437174.1
XP_003437175.1
XP_309217.4
NovelAGAP001023-RE1222155aaAGAP001023-PE
 
Protein coding
F5HJ34 XM_003437123.1
XM_003437124.1
XM_003437125.1
XM_003437126.1
XM_003437127.1
XM_309217.5
XP_003437171.1
XP_003437172.1
XP_003437173.1
XP_003437174.1
XP_003437175.1
XP_309217.4
NovelAGAP001023-RC1195155aaAGAP001023-PC
 
Protein coding
F5HJ34 XM_003437123.1
XM_003437124.1
XM_003437125.1
XM_003437126.1
XM_003437127.1
XM_309217.5
XP_003437171.1
XP_003437172.1
XP_003437173.1
XP_003437174.1
XP_003437175.1
XP_309217.4
NovelAGAP001023-RF1191155aaAGAP001023-PF
 
Protein coding
F5HJ34 XM_003437123.1
XM_003437124.1
XM_003437125.1
XM_003437126.1
XM_003437127.1
XM_309217.5
XP_003437171.1
XP_003437172.1
XP_003437173.1
XP_003437174.1
XP_003437175.1
XP_309217.4
NovelAGAP001023-RB1153155aaAGAP001023-PB
 
Protein coding
F5HJ34 XM_003437123.1
XM_003437124.1
XM_003437125.1
XM_003437126.1
XM_003437127.1
XM_309217.5
XP_003437171.1
XP_003437172.1
XP_003437173.1
XP_003437174.1
XP_003437175.1
XP_309217.4
NovelAGAP001023-RD1110155aaAGAP001023-PD
 
Protein coding
F5HJ34 XM_003437123.1
XM_003437124.1
XM_003437125.1
XM_003437126.1
XM_003437127.1
XM_309217.5
XP_003437171.1
XP_003437172.1
XP_003437173.1
XP_003437174.1
XP_003437175.1
XP_309217.4
Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,153 bps, Translation length: 155 residues

Version

AGAP001023-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays