Location
About this transcript

This transcript has 4 exons, is annotated with 27 domains and features, is associated with 5 variations and maps to 35 oligo probes.

Gene

This transcript is a product of gene AGAP001083 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001083-RD1850224aaAGAP001083-PD
 
Protein coding
F5HM02 XM_001689018.2
XM_003437162.1
XM_003437163.1
XM_317976.5
XP_003437211.1
NovelAGAP001083-RA1728348aaAGAP001083-PA
 
Protein coding
Q7PMX2 XM_001689018.2
XM_003437162.1
XM_003437163.1
XM_317976.5
XP_317976.4
NovelAGAP001083-RC1557453aaAGAP001083-PC
 
Protein coding
A7UUU9 XM_001689018.2
XM_003437162.1
XM_003437163.1
XM_317976.5
XP_001689070.2
XP_003437210.1
NovelAGAP001083-RB1483453aaAGAP001083-PB
 
Protein coding
A7UUU9 XM_001689018.2
XM_003437162.1
XM_003437163.1
XM_317976.5
XP_001689070.2
XP_003437210.1
Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,483 bps, Translation length: 453 residues

Version

AGAP001083-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays