Description

AMP-activated protein kinase, gamma regulatory subunit [Source:VB External Description;Acc:AGAP001446]

Location
About this transcript

This transcript has 6 exons, is annotated with 25 domains and features, is associated with 12 variations and maps to 22 oligo probes.

Gene

This transcript is a product of gene AGAP001446 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001446-RB40051334aaAGAP001446-PB
 
Protein coding
F5HMQ3 Q380G8 XM_003435788.1
XP_003435836.1
NovelAGAP001446-RA3229741aaAGAP001446-PA
 
Protein coding
Q380G8 XM_551386.4
XP_551386.4
NovelAGAP001446-RE2715904aaAGAP001446-PE
 
Protein coding
F5HMQ4 XM_003435789.1
XP_003435837.1
NovelAGAP001446-RC2669888aaAGAP001446-PC
 
Protein coding
F5HMQ2 XM_003435787.1
XP_003435835.1
NovelAGAP001446-RD1689562aaAGAP001446-PD
 
Protein coding
F5HMQ6 XM_003435790.1
XP_003435838.1
Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,689 bps, Translation length: 562 residues

Version

AGAP001446-RD.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays