Location
About this transcript

This transcript has 6 exons, is annotated with 44 domains and features, is associated with 109 variations and maps to 24 oligo probes.

Gene

This transcript is a product of gene AGAP001455 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001455-RA78822253aaAGAP001455-PA
 
Protein coding
A0NH43 XM_001238521.2
XP_001238522.2
NovelAGAP001455-RB64571985aaAGAP001455-PB
 
Protein coding
A0NH42 XM_001238522.2
XP_001238523.2
NovelAGAP001455-RC59201820aaAGAP001455-PC
 
Protein coding
F5HMP8 XM_003435795.1
XP_003435843.1
Statistics

Exons: 6, Coding exons: 6, Transcript length: 5,920 bps, Translation length: 1,820 residues

Version

AGAP001455-RC.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays