Location
About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 7 variations and maps to 23 oligo probes.

Gene

This transcript is a product of gene AGAP001515 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001515-RB1728575aaAGAP001515-PB
 
Protein coding
F5HMN1 XM_003435812.1
XP_003435860.1
NovelAGAP001515-RA1164190aaAGAP001515-PA
 
Protein coding
Q380I4 XM_551305.4
XP_551305.4
Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,164 bps, Translation length: 190 residues

Version

AGAP001515-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays