Location
About this transcript

This transcript has 29 exons, is annotated with 29 domains and features, is associated with 239 variations and maps to 19 oligo probes.

Gene

This transcript is a product of gene AGAP001566 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001566-RB104413389aaAGAP001566-PB
 
Protein coding
F5HML1 XM_003435832.1
XP_003435880.1
NovelAGAP001566-RA102493325aaAGAP001566-PA
 
Protein coding
Q8T5I0 XM_321544.2
XP_321544.1
Statistics

Exons: 29, Coding exons: 29, Transcript length: 10,441 bps, Translation length: 3,389 residues

Version

AGAP001566-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays