Location
About this transcript

This transcript has 6 exons, is annotated with 23 domains and features, is associated with 60 variations and maps to 27 oligo probes.

Gene

This transcript is a product of gene AGAP001590 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001590-RA39201205aaAGAP001590-PA
 
Protein coding
Q7PUW7 Q8T5J9 XM_003435838.1
XM_321515.4
XP_321515.4
NovelAGAP001590-RB3542997aaAGAP001590-PB
 
Protein coding
F5HMK5 XM_003435838.1
XM_321515.4
XP_003435886.1
Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,542 bps, Translation length: 997 residues

Version

AGAP001590-RB.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays