Description

U6 snRNA-associated Sm-like protein LSm1 [Source:VB External Description;Acc:AGAP001686]

Location
About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 10 variations and maps to 19 oligo probes.

Gene

This transcript is a product of gene AGAP001686 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP001686-RA405134aaAGAP001686-PA
 
Protein coding
Q7PY05 XM_001238473.3
XM_321407.3
XP_321407.3
Statistics

Exons: 3, Coding exons: 3, Transcript length: 405 bps, Translation length: 134 residues

Version

AGAP001686-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays