Description

sphingosine-1-phosphate lyase [Source:VB Community Annotation;Acc:AGAP001724]

Location
About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 33 variations and maps to 27 oligo probes.

Gene

This transcript is a product of gene AGAP001724 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
SplyAGAP001724-RA2155541aaAGAP001724-PA
 
Protein coding
Q4JSA1 Q7PY31 XM_321361.5
XP_321361.5
Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,155 bps, Translation length: 541 residues

Version

AGAP001724-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays