Location
About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 33 variations and maps to 53 oligo probes.

Gene

This transcript is a product of gene AGAP003439 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP003439-RA1922594aaAGAP003439-PA
 
Protein coding
Q6IDX1 Q6IDZ8 XM_558891.2
XP_558891.2
NovelAGAP003439-RB1863569aaAGAP003439-PB
 
Protein coding
Q7QDH8 XM_311729.3
XP_311729.3
NovelAGAP003439-RC1854567aaAGAP003439-PC
 
Protein coding
Q6IDZ1 XM_558892.2
XP_558892.2
NovelAGAP003439-RD1815554aaAGAP003439-PD
 
Protein coding
Q6IE01 XM_558893.2
XP_558893.2
NovelAGAP003439-RE1785542aaAGAP003439-PE
 
Protein coding
Q6IDY5 XM_558890.2
XP_558890.2
NovelAGAP003439-RF1782541aaAGAP003439-PF
 
Protein coding
Q7QDI0 XM_311726.3
XP_311726.3
NovelAGAP003439-RG1760559aaAGAP003439-PG
 
Protein coding
Q6IDW3 XM_558886.2
XP_558886.1
NovelAGAP003439-RH1745534aaAGAP003439-PH
 
Protein coding
Q6IDX0 XM_558889.2
XP_558889.2
NovelAGAP003439-RI1731524aaAGAP003439-PI
 
Protein coding
Q6IDW4 XM_558887.2
XP_558887.2
NovelAGAP003439-RJ1722552aaAGAP003439-PJ
 
Protein coding
Q6IDY9 Q7PGB7 XM_311725.3
XP_311725.3
NovelAGAP003439-RK1704515aaAGAP003439-PK
 
Protein coding
Q6IDY6 Q6IDZ5 XM_001688286.1
XP_001688338.1
NovelAGAP003439-RL1656499aaAGAP003439-PL
 
Protein coding
Q6IDX4 Q6IDX7 Q6IDX9
Q6IDY0 Q6IDY1 Q6IDZ3
Q6IDZ4
XM_001688282.1
XP_001688334.1
NovelAGAP003439-RM1636457aaAGAP003439-PM
 
Protein coding
Q6IDY4 XM_001688285.1
XP_001688337.1
NovelAGAP003439-RN1628497aaAGAP003439-PN
 
Protein coding
Q6IDY3 Q6IDZ6 Q6IDZ7
Q6IDZ9
XM_001688288.1
XP_001688340.1
NovelAGAP003439-RO1587478aaAGAP003439-PO
 
Protein coding
Q6IDX8 XM_001688283.1
XP_001688335.1
NovelAGAP003439-RP1583481aaAGAP003439-PP
 
Protein coding
Q6IDX6 Q6IDZ2 XM_001688287.1
XP_001688339.1
NovelAGAP003439-RQ1582474aaAGAP003439-PQ
 
Protein coding
Q6IDW6 Q6IDW7 Q6IDW8
Q6IDY7 Q6IDY8
XM_001688279.1
XP_001688331.1
NovelAGAP003439-RR1581474aaAGAP003439-PR
 
Protein coding
Q6IDW1 Q6IDY2 Q6IDZ0
XM_001688284.1
XP_001688336.1
NovelAGAP003439-RS1563470aaAGAP003439-PS
 
Protein coding
Q6IDX3 Q6IDX5 XM_001688281.1
XP_001688333.1
NovelAGAP003439-RT1559488aaAGAP003439-PT
 
Protein coding
Q6IDW5 Q6IDX2 XM_001688280.1
XP_001688332.1
Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,922 bps, Translation length: 594 residues

Version

AGAP003439-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays