Description

defensin anti-microbial peptide [Source:VB Community Annotation;Acc:AGAP004632]

Location
About this transcript

This transcript has 1 exon, is annotated with 7 domains and features, is associated with 2 variations and maps to 33 oligo probes.

Gene

This transcript is a product of gene AGAP004632 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
DEF2AGAP004632-RA28293aaAGAP004632-PA
 
Protein coding
F7IVT4 Q5TRV9 XM_315186.5
XM_557449.4
XP_557449.3
Statistics

Exons: 1, Coding exons: 1, Transcript length: 282 bps, Translation length: 93 residues

Version

AGAP004632-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays