Description

Ras-related protein Rab-5C [Source:VB External Description;Acc:AGAP007901]

Location
About this transcript

This transcript has 6 exons, is annotated with 19 domains and features, is associated with 10 variations and maps to 38 oligo probes.

Gene

This transcript is a product of gene AGAP007901 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP007901-RE2220216aaAGAP007901-PE
 
Protein coding
A0A1S4GWM9 XM_317585.5
NovelAGAP007901-RD2165216aaAGAP007901-PD
 
Protein coding
A0A1S4GWM9 XM_317585.5
NovelAGAP007901-RA2156216aaAGAP007901-PA
 
Protein coding
A0A1S4GWM9 XM_317585.5
NovelAGAP007901-RC2113216aaAGAP007901-PC
 
Protein coding
A0A1S4GWM9 XM_317585.5
NovelAGAP007901-RF2082216aaAGAP007901-PF
 
Protein coding
A0A1S4GWM9 XM_317585.5
NovelAGAP007901-RG2082216aaAGAP007901-PG
 
Protein coding
A0A1S4GWM9 -
NovelAGAP007901-RB2068216aaAGAP007901-PB
 
Protein coding
A0A1S4GWM9 A0NF86 A1YSB1
-
Statistics

Exons: 6, Coding exons: 4, Transcript length: 2,068 bps, Translation length: 216 residues

Version

AGAP007901-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays