Description

Cellular retinaldehyde-binding protein [Source:VB External Description;Acc:AGAP008165]

Location
About this transcript

This transcript has 5 exons, is annotated with 17 domains and features, is associated with 18 variations and maps to 21 oligo probes.

Gene

This transcript is a product of gene AGAP008165 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtFlags
NovelAGAP008165-RA1977313aaAGAP008165-PA
 
Protein coding
A0A1S4GY60
NovelAGAP008165-RB1946313aaAGAP008165-PB
 
Protein coding
A0A1S4GY60
NovelAGAP008165-RD1914313aaAGAP008165-PD
 
Protein coding
A0A1S4GY60
NovelAGAP008165-RC1895318aaAGAP008165-PC
 
Protein coding
A0A1S4GXG9
NovelAGAP008165-RE1870313aaAGAP008165-PE
 
Protein coding
A0A1S4GY60
NovelAGAP008165-RF1869318aaAGAP008165-PF
 
Protein coding
A0A1S4GXG9 A0A1S4GY60 Q7PNC9
Statistics

Exons: 5, Coding exons: 3, Transcript length: 1,977 bps, Translation length: 313 residues

Version

AGAP008165-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays