Description

histone demethylase [Source:VB External Description;Acc:AGAP008509]

Location
About this transcript

This transcript has 10 exons, is annotated with 46 domains and features, is associated with 97 variations and maps to 61 oligo probes.

Gene

This transcript is a product of gene AGAP008509 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP008509-RA44651344aaAGAP008509-PA
 
Protein coding
A0A1S4GYG5 Q7PNG7 XM_316935.4
Statistics

Exons: 10, Coding exons: 10, Transcript length: 4,465 bps, Translation length: 1,344 residues

Version

AGAP008509-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays