Description

pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Source:VB External Description;Acc:AGAP008528]

Location
About this transcript

This transcript has 4 exons, is annotated with 28 domains and features, is associated with 87 variations and maps to 19 oligo probes.

Gene

This transcript is a product of gene AGAP008528 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP008528-RB36831179aaAGAP008528-PB
 
Protein coding
A0A1S4GZ85 Q7Q4Q1 XM_316912.4
NovelAGAP008528-RA34741157aaAGAP008528-PA
 
Protein coding
A0A1S4GYI5 XM_316912.4
Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,474 bps, Translation length: 1,157 residues

Version

AGAP008528-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays