Description

ubiquitin-conjugating enzyme E2 R [Source:VB External Description;Acc:AGAP008680]

Location
About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 5 variations and maps to 18 oligo probes.

Gene

This transcript is a product of gene AGAP008680 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP008680-RF2393239aaAGAP008680-PF
 
Protein coding
Q7PHX7 XM_314780.3
XP_314780.3
NovelAGAP008680-RH2087239aaAGAP008680-PH
 
Protein coding
Q7PHX7 XM_314780.3
XP_314780.3
NovelAGAP008680-RD1361178aaAGAP008680-PD
 
Protein coding
A0A1S4GYY4 -
NovelAGAP008680-RB1139178aaAGAP008680-PB
 
Protein coding
A0A1S4GYY4 -
NovelAGAP008680-RA1067178aaAGAP008680-PA
 
Protein coding
A0A1S4GYY4 -
Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,361 bps, Translation length: 178 residues

Version

AGAP008680-RD.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays