Description

N-myc downstream regulated [Source:VB External Description;Acc:AGAP008821]

Location
About this transcript

This transcript has 11 exons, is annotated with 11 domains and features, is associated with 22 variations and maps to 17 oligo probes.

Gene

This transcript is a product of gene AGAP008821 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP008821-RA2415438aaAGAP008821-PA
 
Protein coding
A0A1S4GZB7 Q7PHU3 XM_314952.4
XP_314952.3
NovelAGAP008821-RB2344566aaAGAP008821-PB
 
Protein coding
A0A1S4GZC4 -
NovelAGAP008821-RF2032433aaAGAP008821-PF
 
Protein coding
A0A1S4H024 -
NovelAGAP008821-RD1822433aaAGAP008821-PD
 
Protein coding
A0A1S4H024 -
Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,344 bps, Translation length: 566 residues

Version

AGAP008821-RB.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays