Description

N-myc downstream regulated [Source:VB External Description;Acc:AGAP008821]

Location
About this transcript

This transcript has 11 exons, is annotated with 7 domains and features, is associated with 15 variations and maps to 17 oligo probes.

Gene

This transcript is a product of gene AGAP008821 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP008821-RA2415438aaAGAP008821-PA
 
Protein coding
A0A1S4GZB7 Q7PHU3 XM_314952.4
XP_314952.3
NovelAGAP008821-RB2344566aaAGAP008821-PB
 
Protein coding
A0A1S4GZC4 -
NovelAGAP008821-RF2032433aaAGAP008821-PF
 
Protein coding
A0A1S4H024 -
NovelAGAP008821-RD1822433aaAGAP008821-PD
 
Protein coding
A0A1S4H024 -
Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,032 bps, Translation length: 433 residues

Version

AGAP008821-RF.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays