Description

Lipopolysaccharide-induced TNF-alpha factor [Source:VB External Description;Acc:AGAP009053]

Location
About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 4 variations and maps to 32 oligo probes.

Gene

This transcript is a product of gene AGAP009053 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP009053-RA53482aaAGAP009053-PA
 
Protein coding
Q7PW85 XM_319805.4
XP_319805.4
Statistics

Exons: 2, Coding exons: 2, Transcript length: 534 bps, Translation length: 82 residues

Version

AGAP009053-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays