Description

Zinc finger, SWIM-type containing 5 [Source:VB External Description;Acc:AGAP010062]

Location
About this transcript

This transcript has 12 exons, is annotated with 7 domains and features, is associated with 33 variations and maps to 22 oligo probes.

Gene

This transcript is a product of gene AGAP010062 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP010062-RA38421141aaAGAP010062-PA
 
Protein coding
Q7PMD9 XM_319218.4
XP_319218.4
Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,842 bps, Translation length: 1,141 residues

Version

AGAP010062-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays