Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 20 [Source:VB External Description;Acc:AGAP010367]

Location
About this transcript

This transcript has 7 exons, is annotated with 26 domains and features, is associated with 30 variations and maps to 32 oligo probes.

Gene

This transcript is a product of gene AGAP010367 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP010367-RA35881195aaAGAP010367-PA
 
Protein coding
A0A1S4H3S8 Q7QDR0 XM_311576.3
XM_311577.4
XP_311577.4
Statistics

Exons: 7, Coding exons: 7, Transcript length: 3,588 bps, Translation length: 1,195 residues

Version

AGAP010367-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays