Description

ATP-dependent RNA helicase DDX52/ROK1 [Source:VB External Description;Acc:AGAP012358]

Location
About this transcript

This transcript has 4 exons, is annotated with 19 domains and features, is associated with 19 variations and maps to 42 oligo probes.

Gene

This transcript is a product of gene AGAP012358 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP012358-RA2593598aaAGAP012358-PA
 
Protein coding
Q7Q0A7 XM_001689181.1
XM_320199.4
XP_001689233.1
XP_320199.4
NovelAGAP012358-RB2182598aaAGAP012358-PB
 
Protein coding
Q7Q0A7 XM_001689181.1
XM_320196.2
XM_320199.4
XP_001689233.1
XP_320199.4
Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,182 bps, Translation length: 598 residues

Version

AGAP012358-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays