About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 26 variations and maps to 8 oligo probes.

Gene

This transcript is a product of gene AGAP012588 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP012588-RA1044347aaAGAP012588-PA
 
Protein coding
A7UR04 XM_001687751.1
XP_001687803.1
Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,044 bps, Translation length: 347 residues

Version

AGAP012588-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Frameshift introns

Frameshift introns occur at intron number(s) 1, 2.

Transcript-based displays