About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 7 variations and maps to 4 oligo probes.

Gene

This transcript is a product of gene AGAP012665 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP012665-RA714171aaAGAP012665-PA
 
Protein coding
A0NB55 A0NDK8 F5HLE4
XM_001237037.1
XM_001238799.1
XP_001237038.1
XP_001238800.1
NovelAGAP012665-RB669171aaAGAP012665-PB
 
Protein coding
A0NB55 XM_001237037.1
XM_001238799.1
XP_001237038.1
XP_001238800.1
Statistics

Exons: 2, Coding exons: 2, Transcript length: 714 bps, Translation length: 171 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A0NDK8

Version

AGAP012665-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays