Description

LIM and senescent cell antigen-like-containing domain protein 2 [Source:VB External Description;Acc:AGAP012744]

About this transcript

This transcript has 5 exons, is annotated with 27 domains and features, is associated with 3 variations and maps to 17 oligo probes.

Gene

This transcript is a product of gene AGAP012744 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP012744-RA720240aaAGAP012744-PA
 
Protein coding
Q7QL84 XM_307367.3
XP_307367.3
Statistics

Exons: 5, Coding exons: 5, Transcript length: 720 bps, Translation length: 240 residues

Version

AGAP012744-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Frameshift introns

Frameshift introns occur at intron number(s) 2.

Transcript-based displays