Description

ionotropic receptor IR7y [Source:VB Community Annotation;Acc:AGAP013172]

Location
About this transcript

This transcript has 2 exons, is annotated with 12 domains and features, is associated with 36 variations and maps to 18 oligo probes.

Gene

This transcript is a product of gene AGAP013172 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
IR7yAGAP013172-RA1959652aaAGAP013172-PA
 
Protein coding
F5HJW4 XM_003437029.1
XP_003437077.1
Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,959 bps, Translation length: 652 residues

Version

AGAP013172-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays