Location
About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 20 variations and maps to 5 oligo probes.

Gene

This transcript is a product of gene AGAP028117 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtFlags
NovelAGAP028117-RA531176aaAGAP028117-PA
 
Protein coding
A0A1S4HCY1
Statistics

Exons: 2, Coding exons: 2, Transcript length: 531 bps, Translation length: 176 residues

Version

AGAP028117-RA.

Type

Novel protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays