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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Syx1A GeneID_410279

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Description

syntaxin 1A

Location

Primary_assembly CM009941.2: 16,176,811-16,195,265 reverse strand.

Amel_HAv3.1:CM009941.2

About this gene

This gene has 12 transcripts (splice variants), 90 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	XM_006570273	1488	294aa	XP_006570336	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_006570275	7479	256aa	XP_006570338	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	NM_001278326	3007	293aa	NP_001265255	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A087ZW55	-
-	XM_026443539	1609	291aa	XP_026299324	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_026443538	1607	291aa	XP_026299323	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_026443540	1497	254aa	XP_026299325	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006570274	1220	294aa	XP_006570337	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016914662	1107	257aa	XP_016770151	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XR_411797	7863	No protein	-	Nontranslating CDS	-	-
-	XR_411798	7861	No protein	-	Nontranslating CDS	-	-
-	XR_001704700	7750	No protein	-	Nontranslating CDS	-	-
-	XR_003305544	1909	No protein	-	Nontranslating CDS	-	-

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Summary

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