Transcript: XM_001122389

Description

PDZ and LIM domain protein 3, transcript variant X5

Location

About this transcript

This transcript has 10 exons and is annotated with 12 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	XM_026443438	1405	356aa	XP_026299223	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_006566061	1578	306aa	XP_006566124	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9KTC9	-
-	XM_016914549	1525	289aa	XP_016770038	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AHV6	-
-	XM_001122389	1309	356aa	XP_001122389	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016914547	1256	339aa	XP_016770036	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AR02	-
-	XM_006566056	1255	356aa	XP_006566119	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006566059	1193	324aa	XP_006566122	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006566058	1192	332aa	XP_006566121	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006566060	1141	307aa	XP_006566123	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016914548	1133	304aa	XP_016770037	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AHV8	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,309 bps, Translation length: 356 residues

Version

XM_001122389

Type

Protein coding

Annotation Method

RefSeq gene models from NCBI RefSeq using the GFF3 files available from the NCBI FTP site.