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DB built by WormBase

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Gene: let-23 WBGene00002299

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Description

Receptor protein-tyrosine kinase; Receptor tyrosine-protein kinase let-23 [Source:NCBI gene;Acc:174462]

Location

Chromosome II: 9,197,512-9,207,213 forward strand.

WBcel235:BX284602.5

About this gene

This gene has 4 transcripts (splice variants), 114 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	ZK1067.1d.1	4287	1335aa	ZK1067.1d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3AX35	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	ZK1067.1a.1	4336	1323aa	ZK1067.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P24348	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	ZK1067.1c.1	4262	1328aa	ZK1067.1c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5BM27	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	ZK1067.1b.1	3789	1262aa	ZK1067.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5BM28	-	-

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Summary

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