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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by WormBase

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Gene: pdr-1 WBGene00003967

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Description

E3 ubiquitin-protein ligase parkin; RBR-type E3 ubiquitin transferase; Ubiquitin-like domain-containing protein [Source:NCBI gene;Acc:176816]

Location

Chromosome III: 13,771,513-13,773,345 forward strand.

WBcel235:BX284603.4

About this gene

This gene has 4 transcripts (splice variants), 325 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	K08E3.7a.1	1266	386aa	K08E3.7a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9XUS3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	K08E3.7b.1	1183	243aa	K08E3.7b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CLJ6	-	-
-	K08E3.7b.2	1176	243aa	K08E3.7b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CLJ6	-	-
-	K08E3.7c.1	975	324aa	K08E3.7c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CLF7	-	-

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Summary

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