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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Anatomical entity
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Genetic Variation
- Variant table
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ID History
- Gene history

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DB built by WormBase

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Gene: rgs-4 WBGene00004347

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Description

RGS domain-containing protein [Source:NCBI gene;Acc:189666]

Location

Chromosome II: 12,654,747-12,672,415 forward strand.

WBcel235:BX284602.5

About this gene

This gene has 4 transcripts (splice variants), 271 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y38E10A.21d.1	932	308aa	Y38E10A.21d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9MNH1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	Y38E10A.21c.1	1548	240aa	Y38E10A.21c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A486WXG8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y38E10A.21a.1	1515	216aa	Y38E10A.21a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KMK7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y38E10A.21b.1	531	176aa	Y38E10A.21b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KMK5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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