Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by WormBase

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Gene: tns-1 WBGene00006508

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Description

Tensin homolog [Source:NCBI gene;Acc:172215]

Location

Chromosome I: 5,583,407-5,607,529 reverse strand.

WBcel235:BX284601.5

About this gene

This gene has 10 transcripts (splice variants), 92 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	M01E11.7a.1	4401	1354aa	M01E11.7a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L045	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	M01E11.7c.2	4296	949aa	M01E11.7c.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L045	-	-
-	M01E11.7e.1	3954	1317aa	M01E11.7e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L045	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	M01E11.7c.3	3561	949aa	M01E11.7c.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L045	-	-
-	M01E11.7c.1	3284	949aa	M01E11.7c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L045	-	-
tns-1-210	M01E11.7d.1	2382	664aa	M01E11.7d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L045	-	-
-	M01E11.7b.1	1867	417aa	M01E11.7b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L045	-	-
-	M01E11.7f.1	1713	570aa	M01E11.7f.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L045	-	-
-	M01E11.7g.1	954	317aa	M01E11.7g.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L045	-	-
-	M01E11.7h.1	780	259aa	M01E11.7h.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L045	-	-

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Summary

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