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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by WormBase

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Gene: Y48G8AL.13 WBGene00021691

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Description

TLC domain-containing protein [Source:NCBI gene;Acc:171699]

Location

Chromosome I: 1,223,948-1,229,322 reverse strand.

WBcel235:BX284601.5

About this gene

This gene has 4 transcripts (splice variants), 15 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y48G8AL.13a.3	1202	278aa	Y48G8AL.13a.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9BL09	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	Y48G8AL.13a.2	1141	278aa	Y48G8AL.13a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9BL09	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	Y48G8AL.13a.1	1051	278aa	Y48G8AL.13a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9BL09	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	Y48G8AL.13b.1	579	192aa	Y48G8AL.13b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W6RR25	-	-

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Summary

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