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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
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Molecular interactions
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External references
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DB built by WormBase

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Gene: scc-2 WBGene00004166

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Description

Nipped-B-like protein scc-2 [Source:NCBI gene;Acc:173410]

Location

Chromosome II: 240,705-263,663 reverse strand.

WBcel235:BX284602.5

About this gene

This gene has 3 transcripts (splice variants) and 86 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y43H11AL.3a.2	7052	2176aa	Y43H11AL.3a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95XZ5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	Y43H11AL.3a.1	6937	2176aa	Y43H11AL.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95XZ5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	Y43H11AL.3b.1	1248	415aa	Y43H11AL.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95XZ5	-	-

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Summary

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