Summary
- Splice variants
- Transcript comparison
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Sequence
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Metazoan Compara
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DB built by WormBase

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Gene: F40F8.1 WBGene00009575

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Description

UMP-CMP kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20230]

Location

Chromosome II: 11,127,634-11,129,256 forward strand.

WBcel235:BX284602.5

About this gene

This gene has 6 transcripts (splice variants), 100 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
F40F8.1a.3	F40F8.1a.3	1015	191aa	F40F8.1a.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q20230	NP_496386	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
F40F8.1a.4	F40F8.1a.4	992	191aa	F40F8.1a.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q20230	NP_496386	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
F40F8.1a.2	F40F8.1a.2	973	191aa	F40F8.1a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q20230	NP_496386	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
F40F8.1a.1	F40F8.1a.1	964	191aa	F40F8.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q20230	NP_496386	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
F40F8.1b.1	F40F8.1b.1	857	228aa	F40F8.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3ARK6	NP_001300543	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
F40F8.1c	F40F8.1c	1358	No protein	-	A non-coding gene.ncRNA	-	-

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Summary

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Gene-based displays