Multiple PDZ domain protein [Source:NCBI gene;Acc:174657]
Chromosome II: 10,738,635-10,778,126 reverse strand.
WBcel235:BX284602.5
This gene has 10 transcripts (splice variants), 93 orthologues and 2 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| - | C52A11.4a.1 | 7856 | 2393aa | C52A11.4a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EC55 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C52A11.4f.1 | 7834 | 2397aa | C52A11.4f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EC95 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C52A11.4d.1 | 7269 | 2422aa | C52A11.4d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5ECZ8 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| - | C52A11.4g.1 | 7050 | 2188aa | C52A11.4g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5ECF9 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C52A11.4c.1 | 6609 | 2202aa | C52A11.4c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q09EF4 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C52A11.4e.1 | 6555 | 2184aa | C52A11.4e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EGP5 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C52A11.4h.1 | 4230 | 1409aa | C52A11.4h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G1K0W4 | - | - |
| - | C52A11.4i.1 | 2943 | 980aa | C52A11.4i.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G1K0W3 | - | - |
| mpz-1-210 | C52A11.4b.1 | 2549 | 838aa | C52A11.4b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EDY4 | - | - |
| - | C52A11.4j.1 | 1413 | 470aa | C52A11.4j.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G1K0W2 | - | - |
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