Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by WormBase

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Gene: npp-9 WBGene00003795

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Description

Nuclear Pore complex Protein [Source:UniProtKB/TrEMBL;Acc:Q86G90]

Location

Chromosome III: 3,400,644-3,404,479 reverse strand.

WBcel235:BX284603.4

About this gene

This gene has 6 transcripts (splice variants), 137 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F59A2.1b.3	3109	884aa	F59A2.1b.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86G90	NP_871701	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	F59A2.1a.3	3037	860aa	F59A2.1a.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q21021	NP_497703	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	F59A2.1b.2	3034	884aa	F59A2.1b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86G90	NP_871701	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	F59A2.1b.1	3015	884aa	F59A2.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86G90	NP_871701
-	F59A2.1a.2	2962	860aa	F59A2.1a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q21021	NP_497703	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	F59A2.1a.1	2943	860aa	F59A2.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q21021	NP_497703	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays