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DB built by WormBase

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Gene: ppk-3 WBGene00004089

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Description

1-phosphatidylinositol-3-phosphate 5-kinase; PIP Kinase [Source:NCBI gene;Acc:181428]

Location

Chromosome X: 12,968,910-12,975,645 reverse strand.

WBcel235:BX284606.5

About this gene

This gene has 2 transcripts (splice variants), 89 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	VF11C1L.1b.1	4816	1500aa	VF11C1L.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D9I628	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	VF11C1L.1a.1	4849	1497aa	VF11C1L.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5ED98	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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