Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by WormBase

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Gene: ptr-11 WBGene00004225

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Description

PaTched Related family [Source:UniProtKB/TrEMBL;Acc:O44978]

Location

Chromosome I: 160,172-166,819 reverse strand.

WBcel235:BX284601.5

About this gene

This gene has 3 transcripts (splice variants), 84 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F56C11.2a.2	2698	820aa	F56C11.2a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O44978	NP_490687	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	F56C11.2a.1	2680	820aa	F56C11.2a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O44978	NP_490687	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	F56C11.2b.1	2242	669aa	F56C11.2b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CLI4	NP_001293213	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays