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DB built by WormBase

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Gene: ptr-11 WBGene00004225

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Description

SSD domain-containing protein [Source:NCBI gene;Acc:171609]

Location

Chromosome I: 160,172-169,763 reverse strand.

WBcel235:BX284601.5

About this gene

This gene has 3 transcripts (splice variants), 107 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F56C11.2a.2	2813	820aa	F56C11.2a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O44978	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	F56C11.2a.1	2680	820aa	F56C11.2a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O44978	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	F56C11.2b.1	2010	669aa	F56C11.2b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CLI4	-	-

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Summary

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