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DB built by WormBase

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Gene: vit-6 WBGene00006930

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Description

Vitellogenin-6 [Source:NCBI gene;Acc:177619]

Location

Chromosome IV: 8,261,157-8,266,459 forward strand.

WBcel235:BX284604.4

About this gene

This gene has 2 transcripts (splice variants), 168 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	K07H8.6c.1	5048	1651aa	K07H8.6c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P18948	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
-	K07H8.6a.1	5057	1650aa	K07H8.6a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P18948	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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