Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by WormBase

.

Gene: C16A11.5 WBGene00015818

.

Description

LOW QUALITY PROTEIN: Uncharacterized protein CELE_C16A11.5 [Source:RefSeq peptide;Acc:NP_001338811]

Location

Chromosome II: 4,223,309-4,226,330 forward strand.

WBcel235:BX284602.5

About this gene

This gene has 13 transcripts (splice variants), 40 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	C16A11.5b.6	2347	446aa	C16A11.5b.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7RC32	NP_494743	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	C16A11.5b.3	2336	446aa	C16A11.5b.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7RC32	NP_494743	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	C16A11.5b.1	2263	446aa	C16A11.5b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7RC32	NP_494743	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	C16A11.5d.1	2263	212aa	C16A11.5d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7RBJ4	NP_001338810	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	C16A11.5b.5	2252	446aa	C16A11.5b.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7RC32	NP_494743	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	C16A11.5b.4	2230	446aa	C16A11.5b.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7RC32	NP_494743	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	C16A11.5b.2	2219	446aa	C16A11.5b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7RC32	NP_494743	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	C16A11.5c.1	2219	202aa	C16A11.5c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7RBQ2	NP_001338809	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	C16A11.5a.1	2062	412aa	C16A11.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7RC39	NP_001338808	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	C16A11.5a.2	1978	412aa	C16A11.5a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7RC39	NP_001338808	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	C16A11.5a.3	1945	412aa	C16A11.5a.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7RC39	NP_001338808	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	C16A11.5c.2	1945	202aa	C16A11.5c.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7RBQ2	NP_001338809	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	C16A11.5e.1	1942	619aa	C16A11.5e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1X7RBK7	NP_001338811	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5

.

Summary

.

.

Gene-based displays