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DB built by WormBase

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Gene: chat-1 WBGene00019946

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Description

CDC50 family protein chat-1 [Source:NCBI gene;Acc:177213]

Location

Chromosome IV: 4,447,331-4,449,897 forward strand.

WBcel235:BX284604.4

About this gene

This gene has 4 transcripts (splice variants), 88 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	R08C7.2a.1	1289	348aa	R08C7.2a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L0H3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	R08C7.2c.1	504	167aa	R08C7.2c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L0H3	-	-
-	R08C7.2d.1	324	107aa	R08C7.2d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L0H3	-	-
-	R08C7.2b	1213	No protein	-	A non-coding gene.ncRNA	-	-	-

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Summary

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